Protein ZmHB20
ZmHB20 is a protein in the Homeobox family.
Information
TF Name: ZmHB20
Species: Maize
TF Family: Homeobox
Gene Name(Synonym): HB20
Uniprot ID: A0A1D6PDQ1

Protein ZmHB20

ZmHB20 is a protein in the Homeobox family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d048471DAPseq no logo sequence fimo position
Zm00001d048471DAPseq no logo sequence fimo position
Zm00001d048471ChIPseq no logo sequence fimo position
Zm00001d048471PChIPseq no logo sequence fimo position

Interactions where ZmHB20 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHB20 is the target  
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There are 110 protein-dna interactions that fit this criteria. download excel sheet

GRMZM2G060507_T01 from maize genome v3


Related TFome: pUT6801

Amino Acid Sequence
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MLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGVTLEEGTGATMSEEDEDEAPMLEVGLVDMGSDGHDMMGFGPLL
PTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQQHSKWPYPTEDDKARLVEETGLQ
LKQINNWFINQRKRNWHNNSQTSTLKSKRKR

MLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGVTLEEGTGATMSEEDEDEAPMLEVGLVDMGSDGHDMMGFGPLL
PTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQQHSKWPYPTEDDKARLVEETGLQ
LKQINNWFINQRKRNWHNNSQTSTLKSKRKR

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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AGCTCGCGCAGTCCAGCGGCCTCCT...

Zm00001d048471_T001 from maize genome v4

Amino Acid Sequence
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MQGGGGDQTGGSLGMGVGVGYAGGGGGGGAECSSSSVAAAAAAAAAAAEAEERQLLKGEIAVHPLCEQLVAAHVGCLRVA
TPIDHLPLIDAQLAQSSGLLHSYAAHHSPFLSPHDKHDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQ
DLTGVTLEEGTGATMSEEDEDEAPMLEVGLVDMGSDGHDMMGFGPLLPTDSERSLMERVRQELKIELKQGFKSRIEDVRE
EILRKRRAGKLPGDTTSILKQWWQQHSKWPYPTEDDKARLVEETGLQLKQINNWFINQRKRNWHNNSQTSTLKSKRKR

Nucleotide Sequence
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CCCGGCTTAGCTAAGAACCCTCGAA...

Zm00001d048471_T002 from maize genome v4

Amino Acid Sequence
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MQGGGAAAAAAEAEERQLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHSPFLSPHDKH
DLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGVTLEEGTGATMSEEDEDEAPMLEVGLVDMGSDG
HDMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQQHSKWPYPTEDDKARLVEET
GLQLKQINNWFINQRKRNWHNNSQTSTLKSKRKR

Nucleotide Sequence
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GTGCGCAAACCACCAACCAGAGCGA...

Zm00001eb403720_T001 from maize genome v5

Amino Acid Sequence
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MQGGGGDQTGGSLGMGVGVGYAGGGGGGGAECSSSSVAAAAAAAAAAAEAEERQLLKGEIAVHPLCEQLVAAHVGCLRVA
TPIDHLPLIDAQLAQSSGLLHSYAAHHSPFLSPHDKHDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQ
DLTGVTLEEGTGATMSEEDEDEAPMLEVGLVDMGSDGHDMMGFGPLLPTDSERSLMERVRQELKIELKQGFKSRIEDVRE
EILRKRRAGKLPGDTTSILKQWWQQHSKWPYPTEDDKARLVEETGLQLKQINNWFINQRKRNWHNNSQTSTLKSKRKR

Nucleotide Sequence
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GTCCAGTTGCTTCATAAGCTACCCA...

Zm00001eb403720_T002 from maize genome v5

Amino Acid Sequence
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MQGGGGDQTGGSLGMGVGVGYAGGGGGGGAECSSSSVAAAAAAAAAAAEAEERQLLKGEIAVHPLCEQLVAAHVGCLRVA
TPIDHLPLIDAQLAQSSGLLHSYAAHHSPFLSPHDKHDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQ
DLTGVTLEEGTGATMSEEDEDEAPMLEVGLVDMGSDGHDMMGFGPLLPTDSERSLMERVRQELKIELKQGFKSRIEDVRE
EILRKRRAGKLPGDTTSILKQWWQQHSKWPYPTVSALYS

Nucleotide Sequence
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GTCCAGTTGCTTCATAAGCTACCCA...


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